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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs10768976 chr11:43773813 T/G HSD17B12 chr11:43702108-43878167:+ 0.49 5.83 3.59E-7 Box Plot
ACC rs10771794 chr12:31183145 C/T DDX11 chr12:31226779-31257725:+ 0.71 6.06 1.54E-7 Box Plot
ACC rs10771796 chr12:31185709 A/G DDX11 chr12:31226779-31257725:+ 0.71 6.55 2.6E-8 Box Plot
ACC rs10775621 chr19:16057677 A/G CYP4F11 chr19:16023177-16045677:- 0.59 5.4 1.66E-6 Box Plot
ACC rs10779588 chr1:213038336 C/G LQK1 chr1:213029947-213031480:- 0.92 7.96 1.47E-10 Box Plot
ACC rs10779589 chr1:213038588 A/G LQK1 chr1:213029947-213031480:- 0.83 9.77 2.3E-13 Box Plot
ACC rs10779590 chr1:213050123 G/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs10779591 chr1:213052891 G/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs10779592 chr1:213053088 G/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs10779593 chr1:213053179 A/G LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs10779595 chr1:213062158 T/C LQK1 chr1:213029947-213031480:- 0.86 9.69 3.06E-13 Box Plot
ACC rs10787728 chr10:118509599 C/T KIAA1598 chr10:118643742-118886097:- 0.69 5.32 2.22E-6 Box Plot
ACC rs10789138 chr1:63859046 A/G ITGB3BP chr1:63906441-64059392:- 0.58 6.04 1.67E-7 Box Plot
ACC rs10789141 chr1:63959913 C/T ITGB3BP chr1:63906441-64059392:- 0.57 6.33 5.71E-8 Box Plot
ACC rs10793107 chr11:74695175 T/G XRRA1 chr11:74518784-74660245:- 0.68 5.52 1.08E-6 Box Plot